Quick-Start Guide
Installing Workflows
To view the content of the package
Go to MSK-ACCESS github page: https://github.com/msk-access
Download
Please replace workflow with a given repository
curl -LO https://github.com/msk-access/workflow/archive/master.zip
Install
Install these tools with sudo rights:
unzip master.zip
cd PIe-master
python setup.py install
Install these tools without sudo rights:
unzip master.zip
cd workflow-master
python setup.py install --user
Quick Access
Add following to your .bashrc or .bash_profile for accessing the *.cwl tools:
When installed without sudo rights:
# Set PATH to include local python bin if found
if [ -d "$HOME/.local/bin" ]; then
PATH="$HOME/.local/bin:$PATH"
fi